Combinatorial Optimization in Biology

Publications

• E. Czabarka, G. Konjevod, M.V. Marathe, A.G. Percus, and D.C. Torney, ``Algorithms for optimizing production DNA sequencing'' (PDF format, 298K, or gzip'd Postscript format, 111K), Proceedings of the 11th Annual ACM-SIAM Symposium on Discrete Algorithms (SODA '00), 399-408 (2000).

• A.G. Percus and D.C. Torney, ``Greedy Algorithms for Optimized DNA Sequencing'' (PDF format, 117K, or gzip'd Postscript format, 36K), Proceedings of the 10th Annual ACM-SIAM Symposium on Discrete Algorithms (SODA '99), S955-S956 (1999).

• M.O. Mundt, A.G. Percus, and D.C. Torney, ``A Figure of Merit for DNA Sequence Data,'' DOE Human Genome Program Contractor-Grantee Workshop VII, Oakland, CA, 12-16 January 1999.

Related links

• An old but nevertheless quite informative issue of Los Alamos Science dealing with the Human Genome Project.

• The Complex Systems Modeling Research Focus in the Modeling, Algorithms and Informatics (CCS-3) group.

• LANL's Biosciences Division.

Last modified: 5 July 2003